Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.36■□□□□ 0.37
HACD3Q9P035 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.36■□□□□ 0.37
HACD3Q9P035 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.36■□□□□ 0.37
HACD3Q9P035 AL691432.3-201ENST00000621860 400 ntBASIC17.36■□□□□ 0.37
HACD3Q9P035 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.36■□□□□ 0.37
HACD3Q9P035 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 AC097637.2-201ENST00000624096 1997 ntBASIC17.36■□□□□ 0.37
HACD3Q9P035 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 NCF1C-201ENST00000438382 1427 ntBASIC17.36■□□□□ 0.37
HACD3Q9P035 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HACD3Q9P035 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.36■□□□□ 0.37
HACD3Q9P035 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.36■□□□□ 0.37
HACD3Q9P035 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
HACD3Q9P035 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HACD3Q9P035 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
HACD3Q9P035 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 AC004870.1-201ENST00000315132 882 ntBASIC17.35■□□□□ 0.37
HACD3Q9P035 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.35■□□□□ 0.37
HACD3Q9P035 SLC25A1P3-201ENST00000395415 828 ntBASIC17.35■□□□□ 0.37
HACD3Q9P035 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 FAAHP1-202ENST00000446499 1238 ntBASIC17.35■□□□□ 0.37
HACD3Q9P035 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 SART3-203ENST00000546611 1184 ntBASIC17.35■□□□□ 0.37
HACD3Q9P035 KRT126P-201ENST00000549467 1181 ntBASIC17.35■□□□□ 0.37
HACD3Q9P035 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.35■□□□□ 0.37
HACD3Q9P035 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.35■□□□□ 0.37
HACD3Q9P035 AL589182.2-201ENST00000619332 1049 ntBASIC17.35■□□□□ 0.37
HACD3Q9P035 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.35■□□□□ 0.37
HACD3Q9P035 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HACD3Q9P035 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HACD3Q9P035 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.35■□□□□ 0.37
HACD3Q9P035 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HACD3Q9P035 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HACD3Q9P035 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.34■□□□□ 0.37
HACD3Q9P035 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.34■□□□□ 0.37
HACD3Q9P035 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.34■□□□□ 0.37
HACD3Q9P035 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.34■□□□□ 0.37
HACD3Q9P035 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.34■□□□□ 0.37
HACD3Q9P035 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 EGFEM1P-202ENST00000431685 1563 ntBASIC17.34■□□□□ 0.37
HACD3Q9P035 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.34■□□□□ 0.37
HACD3Q9P035 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.34■□□□□ 0.37
HACD3Q9P035 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.34■□□□□ 0.37
HACD3Q9P035 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.34■□□□□ 0.37
HACD3Q9P035 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 AC004817.3-201ENST00000602957 2129 ntBASIC17.34■□□□□ 0.37
HACD3Q9P035 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
HACD3Q9P035 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HACD3Q9P035 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HACD3Q9P035 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
HACD3Q9P035 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HACD3Q9P035 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HACD3Q9P035 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.33■□□□□ 0.37
HACD3Q9P035 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HACD3Q9P035 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HACD3Q9P035 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms