Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 AC018712.1-201ENST00000455767 687 ntBASIC16.06■□□□□ 0.16
CNIH4Q9P003 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.06■□□□□ 0.16
CNIH4Q9P003 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 AC106886.4-201ENST00000623557 2502 ntBASIC16.06■□□□□ 0.16
CNIH4Q9P003 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH4Q9P003 AC060834.1-201ENST00000443027 2032 ntBASIC16.06■□□□□ 0.16
CNIH4Q9P003 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 AC132938.5-201ENST00000624980 1813 ntBASIC16.05■□□□□ 0.16
CNIH4Q9P003 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 AL031284.1-201ENST00000419297 478 ntBASIC16.05■□□□□ 0.16
CNIH4Q9P003 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 SIGLEC30P-201ENST00000455569 941 ntBASIC16.05■□□□□ 0.16
CNIH4Q9P003 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 STK19B-204ENST00000512515 211 ntBASIC16.05■□□□□ 0.16
CNIH4Q9P003 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 STK25P1-201ENST00000585406 838 ntBASIC16.05■□□□□ 0.16
CNIH4Q9P003 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 MTDHP4-201ENST00000600287 670 ntBASIC16.05■□□□□ 0.16
CNIH4Q9P003 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH4Q9P003 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CNIH4Q9P003 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 HLA-A-201ENST00000376802 1334 ntBASIC16.04■□□□□ 0.16
CNIH4Q9P003 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CNIH4Q9P003 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNIH4Q9P003 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms