Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NEUROD4Q9HD90 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
NEUROD4Q9HD90 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.21■□□□□ 0.18
NEUROD4Q9HD90 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.21■□□□□ 0.18
NEUROD4Q9HD90 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NEUROD4Q9HD90 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
NEUROD4Q9HD90 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NEUROD4Q9HD90 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 SIGLEC16-201ENST00000599858 1437 ntBASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEUROD4Q9HD90 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 FAAHP1-202ENST00000446499 1238 ntBASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 AC099336.1-202ENST00000602961 463 ntBASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 AC099398.1-201ENST00000567919 2776 ntBASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 FRMD8P1-201ENST00000440433 1524 ntBASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEUROD4Q9HD90 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NEUROD4Q9HD90 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms