Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 IGHV3-52-201ENST00000519770 353 ntBASIC15.9■□□□□ 0.14
UBQLN3Q9H347 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 AL049840.3-201ENST00000602669 611 ntBASIC15.9■□□□□ 0.14
UBQLN3Q9H347 BX640515.1-201ENST00000617215 977 ntBASIC15.9■□□□□ 0.14
UBQLN3Q9H347 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 AC107918.4-202ENST00000641623 219 ntBASIC15.9■□□□□ 0.14
UBQLN3Q9H347 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 AC060834.1-201ENST00000443027 2032 ntBASIC15.9■□□□□ 0.14
UBQLN3Q9H347 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 AC148477.5-201ENST00000625164 1645 ntBASIC15.9■□□□□ 0.14
UBQLN3Q9H347 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
UBQLN3Q9H347 AC004817.3-201ENST00000602957 2129 ntBASIC15.89■□□□□ 0.13
UBQLN3Q9H347 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 AL118508.1-201ENST00000613502 2345 ntBASIC15.89■□□□□ 0.13
UBQLN3Q9H347 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 MYCLP1-201ENST00000372451 1075 ntBASIC15.89■□□□□ 0.13
UBQLN3Q9H347 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 OR7E14P-202ENST00000530490 1290 ntBASIC15.89■□□□□ 0.13
UBQLN3Q9H347 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN3Q9H347 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 AC243591.1-201ENST00000452967 1364 ntBASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.88■□□□□ 0.13
UBQLN3Q9H347 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 LAGE3P1-201ENST00000425356 484 ntBASIC15.88■□□□□ 0.13
UBQLN3Q9H347 AC093909.1-201ENST00000504731 1122 ntBASIC15.88■□□□□ 0.13
UBQLN3Q9H347 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 AC139887.3-201ENST00000568585 713 ntBASIC15.88■□□□□ 0.13
UBQLN3Q9H347 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 AL139327.4-201ENST00000612362 153 ntBASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 AGGF1P2-201ENST00000426656 2106 ntBASIC15.88■□□□□ 0.13
UBQLN3Q9H347 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN3Q9H347 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBQLN3Q9H347 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms