Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 AC026396.1-201ENST00000419388 421 ntBASIC15.8■□□□□ 0.12
TRIM2Q9C040 SIGLEC30P-201ENST00000455569 941 ntBASIC15.8■□□□□ 0.12
TRIM2Q9C040 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 AC092053.1-201ENST00000605787 1936 ntBASIC15.8■□□□□ 0.12
TRIM2Q9C040 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 AC011676.5-201ENST00000624864 2660 ntBASIC15.8■□□□□ 0.12
TRIM2Q9C040 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM2Q9C040 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM2Q9C040 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 GPR89P-201ENST00000407924 1495 ntBASIC15.78■□□□□ 0.12
TRIM2Q9C040 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 AL020989.1-201ENST00000422979 469 ntBASIC15.78■□□□□ 0.12
TRIM2Q9C040 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TRIM2Q9C040 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM2Q9C040 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM2Q9C040 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM2Q9C040 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms