Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC3Q9BY71 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 SLC25A1P3-201ENST00000395415 828 ntBASIC17.8■□□□□ 0.44
LRRC3Q9BY71 AL355306.1-201ENST00000415580 579 ntBASIC17.8■□□□□ 0.44
LRRC3Q9BY71 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 LINC02084-201ENST00000606069 1096 ntBASIC17.8■□□□□ 0.44
LRRC3Q9BY71 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 BCL2-203ENST00000589955 5011 ntBASIC17.8■□□□□ 0.44
LRRC3Q9BY71 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRC3Q9BY71 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 HMGA1P7-201ENST00000406908 502 ntBASIC17.79■□□□□ 0.44
LRRC3Q9BY71 KRT8P48-201ENST00000515599 1220 ntBASIC17.79■□□□□ 0.44
LRRC3Q9BY71 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC3Q9BY71 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 AL671277.1-201ENST00000429656 993 ntBASIC17.78■□□□□ 0.44
LRRC3Q9BY71 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 AC109322.1-201ENST00000524499 1264 ntBASIC17.78■□□□□ 0.44
LRRC3Q9BY71 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 AC026120.1-201ENST00000611536 926 ntBASIC17.78■□□□□ 0.44
LRRC3Q9BY71 AC106028.4-201ENST00000614509 607 ntBASIC17.78■□□□□ 0.44
LRRC3Q9BY71 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRC3Q9BY71 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms