Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 SNHG9-202ENST00000564014 471 ntBASIC19.89■□□□□ 0.77
SLF1Q9BQI6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLF1Q9BQI6 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.88■□□□□ 0.77
SLF1Q9BQI6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 AC087163.2-201ENST00000457299 853 ntBASIC19.88■□□□□ 0.77
SLF1Q9BQI6 SLC25A6P2-201ENST00000497974 877 ntBASIC19.88■□□□□ 0.77
SLF1Q9BQI6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SLF1Q9BQI6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 AL355312.1-201ENST00000407115 2176 ntBASIC19.87■□□□□ 0.77
SLF1Q9BQI6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 FAM58CP-201ENST00000435741 640 ntBASIC19.87■□□□□ 0.77
SLF1Q9BQI6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 AL031432.2-201ENST00000566714 459 ntBASIC19.87■□□□□ 0.77
SLF1Q9BQI6 AL928711.1-201ENST00000570165 459 ntBASIC19.87■□□□□ 0.77
SLF1Q9BQI6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 ACTL9-202ENST00000612068 1252 ntBASIC19.87■□□□□ 0.77
SLF1Q9BQI6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLF1Q9BQI6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLF1Q9BQI6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms