Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
AP1S3Q96PC3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 RPPH1-201ENST00000516869 333 ntBASIC13.02□□□□□ -0.33
AP1S3Q96PC3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 AC112497.1-201ENST00000624824 639 ntBASIC13.02□□□□□ -0.33
AP1S3Q96PC3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 HLA-J-201ENST00000462773 1622 ntBASIC13.02□□□□□ -0.33
AP1S3Q96PC3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 LINC02199-201ENST00000506655 2702 ntBASIC13.02□□□□□ -0.33
AP1S3Q96PC3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
AP1S3Q96PC3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 CRYGFP-201ENST00000418459 633 ntBASIC13.01□□□□□ -0.33
AP1S3Q96PC3 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.01□□□□□ -0.33
AP1S3Q96PC3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 NUDT16P1-203ENST00000513809 620 ntBASIC13.01□□□□□ -0.33
AP1S3Q96PC3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 WWOX-216ENST00000569818 525 ntBASIC13.01□□□□□ -0.33
AP1S3Q96PC3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.01□□□□□ -0.33
AP1S3Q96PC3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms