Protein–RNA interactions for Protein: Q96JC9

EAF1, ELL-associated factor 1, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EAF1Q96JC9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EAF1Q96JC9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EAF1Q96JC9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
EAF1Q96JC9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.02□□□□□ -0.16
EAF1Q96JC9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
EAF1Q96JC9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
EAF1Q96JC9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
EAF1Q96JC9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EAF1Q96JC9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.02□□□□□ -0.16
EAF1Q96JC9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
EAF1Q96JC9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.02□□□□□ -0.16
EAF1Q96JC9 AP005117.1-201ENST00000584346 1413 ntBASIC14.02□□□□□ -0.16
EAF1Q96JC9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 KLF4P1-201ENST00000412782 1185 ntBASIC14.02□□□□□ -0.17
EAF1Q96JC9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 IFNL4P1-201ENST00000607083 540 ntBASIC14.02□□□□□ -0.17
EAF1Q96JC9 AP001269.4-201ENST00000609611 512 ntBASIC14.02□□□□□ -0.17
EAF1Q96JC9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EAF1Q96JC9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.02□□□□□ -0.17
EAF1Q96JC9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 RBM17P3-201ENST00000417687 1192 ntBASIC14.01□□□□□ -0.17
EAF1Q96JC9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 AC106795.1-205ENST00000512851 1056 ntBASIC14.01□□□□□ -0.17
EAF1Q96JC9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
EAF1Q96JC9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
EAF1Q96JC9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EAF1Q96JC9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EAF1Q96JC9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
EAF1Q96JC9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14□□□□□ -0.17
EAF1Q96JC9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14□□□□□ -0.17
EAF1Q96JC9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
EAF1Q96JC9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
EAF1Q96JC9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14□□□□□ -0.17
EAF1Q96JC9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
EAF1Q96JC9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14□□□□□ -0.17
EAF1Q96JC9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14□□□□□ -0.17
EAF1Q96JC9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
EAF1Q96JC9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14□□□□□ -0.17
EAF1Q96JC9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
EAF1Q96JC9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms