Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 REXO1L3P-201ENST00000622202 1288 ntBASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 AC004832.2-201ENST00000426397 482 ntBASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 AC023141.13-201ENST00000604991 943 ntBASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 AC004877.2-201ENST00000623941 599 ntBASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 AC007064.4-201ENST00000637740 555 ntBASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMARCD1Q96GM5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SMARCD1Q96GM5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SMARCD1Q96GM5 BCAR1-209ENST00000546196 1340 ntBASIC17.96■□□□□ 0.46
SMARCD1Q96GM5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 AC092865.5-201ENST00000545435 363 ntBASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 DUX4L17-201ENST00000557360 1267 ntBASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMARCD1Q96GM5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 AL021920.2-201ENST00000624828 1351 ntBASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMARCD1Q96GM5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms