Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 LINC02084-201ENST00000606069 1096 ntBASIC17.14■□□□□ 0.33
SIPA1Q96FS4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 AL671277.1-201ENST00000429656 993 ntBASIC17.13■□□□□ 0.33
SIPA1Q96FS4 AC140658.5-201ENST00000438532 169 ntBASIC17.13■□□□□ 0.33
SIPA1Q96FS4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 TIMM8BP1-201ENST00000452384 211 ntBASIC17.13■□□□□ 0.33
SIPA1Q96FS4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 FAM86C2P-203ENST00000528684 1004 ntBASIC17.13■□□□□ 0.33
SIPA1Q96FS4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 AC135050.7-201ENST00000624508 2218 ntBASIC17.13■□□□□ 0.33
SIPA1Q96FS4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 AC133963.1-201ENST00000504166 1679 ntBASIC17.13■□□□□ 0.33
SIPA1Q96FS4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIPA1Q96FS4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 AC023141.5-201ENST00000458585 616 ntBASIC17.12■□□□□ 0.33
SIPA1Q96FS4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 AC025678.2-201ENST00000562061 970 ntBASIC17.12■□□□□ 0.33
SIPA1Q96FS4 MIR4515-201ENST00000584082 81 ntBASIC17.12■□□□□ 0.33
SIPA1Q96FS4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 AC026120.1-201ENST00000611536 926 ntBASIC17.12■□□□□ 0.33
SIPA1Q96FS4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms