Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 RBM17P3-201ENST00000417687 1192 ntBASIC17.45■□□□□ 0.38
RTP4Q96DX8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 AC009078.2-202ENST00000463353 338 ntBASIC17.45■□□□□ 0.38
RTP4Q96DX8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 AC104692.2-201ENST00000603054 253 ntBASIC17.45■□□□□ 0.38
RTP4Q96DX8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.45■□□□□ 0.38
RTP4Q96DX8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 AC079781.3-201ENST00000449110 356 ntBASIC17.44■□□□□ 0.38
RTP4Q96DX8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 AL160237.2-201ENST00000556165 472 ntBASIC17.44■□□□□ 0.38
RTP4Q96DX8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 TERC-201ENST00000602385 541 ntBASIC17.44■□□□□ 0.38
RTP4Q96DX8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 AL139288.1-201ENST00000623748 933 ntBASIC17.44■□□□□ 0.38
RTP4Q96DX8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTP4Q96DX8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.44■□□□□ 0.38
RTP4Q96DX8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 AL021920.2-201ENST00000624828 1351 ntBASIC17.43■□□□□ 0.38
RTP4Q96DX8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 UBALD1-205ENST00000590891 2641 ntBASIC17.43■□□□□ 0.38
RTP4Q96DX8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 TNRC18P3-201ENST00000441896 2691 ntBASIC17.43■□□□□ 0.38
RTP4Q96DX8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.43■□□□□ 0.38
RTP4Q96DX8 AL022326.1-202ENST00000641533 845 ntBASIC17.43■□□□□ 0.38
RTP4Q96DX8 NCF1C-201ENST00000438382 1427 ntBASIC17.43■□□□□ 0.38
RTP4Q96DX8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTP4Q96DX8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms