Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.76■□□□□ 0.11
HPS1Q92902 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS1Q92902 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.76■□□□□ 0.11
HPS1Q92902 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.76■□□□□ 0.11
HPS1Q92902 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.76■□□□□ 0.11
HPS1Q92902 AC116407.4-201ENST00000623319 1061 ntBASIC15.76■□□□□ 0.11
HPS1Q92902 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HPS1Q92902 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.76■□□□□ 0.11
HPS1Q92902 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HPS1Q92902 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.76■□□□□ 0.11
HPS1Q92902 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS1Q92902 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS1Q92902 AC034236.2-201ENST00000606662 1610 ntBASIC15.76■□□□□ 0.11
HPS1Q92902 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS1Q92902 AC008556.1-201ENST00000610908 2040 ntBASIC15.75■□□□□ 0.11
HPS1Q92902 AC144831.1-201ENST00000573312 2656 ntBASIC15.75■□□□□ 0.11
HPS1Q92902 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HPS1Q92902 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.75■□□□□ 0.11
HPS1Q92902 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS1Q92902 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.75■□□□□ 0.11
HPS1Q92902 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
HPS1Q92902 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 MIR564-202ENST00000385049 94 ntBASIC15.75■□□□□ 0.11
HPS1Q92902 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.75■□□□□ 0.11
HPS1Q92902 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.75■□□□□ 0.11
HPS1Q92902 AC112907.2-201ENST00000448639 330 ntBASIC15.75■□□□□ 0.11
HPS1Q92902 KRT18P56-201ENST00000507275 550 ntBASIC15.75■□□□□ 0.11
HPS1Q92902 VENTXP5-201ENST00000523979 775 ntBASIC15.75■□□□□ 0.11
HPS1Q92902 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.75■□□□□ 0.11
HPS1Q92902 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS1Q92902 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS1Q92902 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HPS1Q92902 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS1Q92902 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS1Q92902 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS1Q92902 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 AC005332.1-201ENST00000577698 1310 ntBASIC15.74■□□□□ 0.11
HPS1Q92902 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 AC034232.1-201ENST00000506026 1064 ntBASIC15.74■□□□□ 0.11
HPS1Q92902 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 ZNF444P1-201ENST00000559497 298 ntBASIC15.74■□□□□ 0.11
HPS1Q92902 GCSHP2-201ENST00000560971 527 ntBASIC15.74■□□□□ 0.11
HPS1Q92902 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.74■□□□□ 0.11
HPS1Q92902 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HPS1Q92902 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms