Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
USP6NLQ92738 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 WASH6P-202ENST00000359512 1437 ntBASIC19.28■□□□□ 0.68
USP6NLQ92738 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6NLQ92738 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
USP6NLQ92738 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP6NLQ92738 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.28■□□□□ 0.68
USP6NLQ92738 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.28■□□□□ 0.68
USP6NLQ92738 AC069120.2-201ENST00000524091 540 ntBASIC19.28■□□□□ 0.68
USP6NLQ92738 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.28■□□□□ 0.68
USP6NLQ92738 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6NLQ92738 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 GNAS-203ENST00000306120 1878 ntBASIC19.28■□□□□ 0.68
USP6NLQ92738 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
USP6NLQ92738 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 AL354751.1-201ENST00000412768 1863 ntBASIC19.28■□□□□ 0.68
USP6NLQ92738 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
USP6NLQ92738 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
USP6NLQ92738 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
USP6NLQ92738 CRB3P1-201ENST00000449338 276 ntBASIC19.27■□□□□ 0.68
USP6NLQ92738 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.27■□□□□ 0.68
USP6NLQ92738 IGHV3-42-201ENST00000520410 361 ntBASIC19.27■□□□□ 0.68
USP6NLQ92738 AP000842.3-202ENST00000569238 1080 ntBASIC19.27■□□□□ 0.68
USP6NLQ92738 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.27■□□□□ 0.68
USP6NLQ92738 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.27■□□□□ 0.68
USP6NLQ92738 AC008267.7-201ENST00000624570 1194 ntBASIC19.27■□□□□ 0.68
USP6NLQ92738 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
USP6NLQ92738 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.27■□□□□ 0.68
USP6NLQ92738 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6NLQ92738 LETM1P2-201ENST00000597330 2178 ntBASIC19.27■□□□□ 0.68
USP6NLQ92738 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP6NLQ92738 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
USP6NLQ92738 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP6NLQ92738 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP6NLQ92738 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP6NLQ92738 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.27■□□□□ 0.67
USP6NLQ92738 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP6NLQ92738 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.26■□□□□ 0.67
USP6NLQ92738 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.26■□□□□ 0.67
USP6NLQ92738 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
USP6NLQ92738 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.26■□□□□ 0.67
USP6NLQ92738 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.26■□□□□ 0.67
USP6NLQ92738 MRPS18AP1-201ENST00000414458 589 ntBASIC19.26■□□□□ 0.67
USP6NLQ92738 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.26■□□□□ 0.67
USP6NLQ92738 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.26■□□□□ 0.67
USP6NLQ92738 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.26■□□□□ 0.67
USP6NLQ92738 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 AC004890.2-204ENST00000481968 304 ntBASIC19.26■□□□□ 0.67
USP6NLQ92738 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.26■□□□□ 0.67
USP6NLQ92738 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.26■□□□□ 0.67
USP6NLQ92738 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6NLQ92738 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.26■□□□□ 0.67
USP6NLQ92738 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
USP6NLQ92738 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6NLQ92738 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USP6NLQ92738 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP6NLQ92738 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP6NLQ92738 AL353732.1-201ENST00000569618 1459 ntBASIC19.25■□□□□ 0.67
USP6NLQ92738 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP6NLQ92738 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms