Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 MIR149-201ENST00000384879 89 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 NFYC-AS1-201ENST00000606277 1687 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AL512408.1-201ENST00000569378 2000 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 SRD5A3P1-201ENST00000603021 949 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 NOC2LP1-202ENST00000452600 2235 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 MTND6P24-201ENST00000440466 518 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 KRT8P22-201ENST00000562317 1415 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 CCL25-202ENST00000315626 450 ntTSL 2 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 RN7SL846P-201ENST00000467429 292 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 SCARNA21-201ENST00000517026 139 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 AL158212.4-201ENST00000624062 1286 ntBASIC6.79□□□□□ -1.32
SYNE2Q8WXH0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 AF254983.2-201ENST00000612331 135 ntBASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 AC025271.4-201ENST00000621477 1726 ntBASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SYNE2Q8WXH0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms