Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 NME2P1-201ENST00000426182 414 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 SPCS2P4-201ENST00000436160 681 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 SPDYE14P-201ENST00000442619 822 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 SLC25A6P2-201ENST00000497974 877 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AC069120.2-201ENST00000524091 540 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AL161645.1-201ENST00000622716 1255 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AC100803.2-201ENST00000562459 1963 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 AC087163.2-201ENST00000457299 853 ntBASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 IGHV3-62-201ENST00000520057 340 ntBASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 AL596325.1-201ENST00000563991 1082 ntBASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 AC084121.4-201ENST00000641598 221 ntBASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 AF228730.8-201ENST00000642140 221 ntBASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNIP1Q8TAD8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 PIN1P1-201ENST00000412108 996 ntBASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 COX5BP8-201ENST00000416911 349 ntBASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 AC097493.3-201ENST00000509725 367 ntBASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 AL662799.1-202ENST00000614205 422 ntBASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms