Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRFBP1Q8NEF9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 AL121761.2-201ENST00000598007 1648 ntBASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 AC004706.3-202ENST00000621574 984 ntBASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 AC107918.4-202ENST00000641623 219 ntBASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SRFBP1Q8NEF9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 TPM4P1-201ENST00000436100 807 ntBASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 FAM197Y8-203ENST00000450145 560 ntBASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 OR7E14P-202ENST00000530490 1290 ntBASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 AC025062.2-201ENST00000605477 670 ntBASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 AL590787.1-201ENST00000568856 1315 ntBASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 NFIC-211ENST00000641145 8399 ntBASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.34■□□□□ 0.21
SRFBP1Q8NEF9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRFBP1Q8NEF9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms