Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PGBD3Q8N328 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PGBD3Q8N328 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PGBD3Q8N328 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PGBD3Q8N328 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PGBD3Q8N328 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PGBD3Q8N328 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.4■□□□□ 0.38
PGBD3Q8N328 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PGBD3Q8N328 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PGBD3Q8N328 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PGBD3Q8N328 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PGBD3Q8N328 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PGBD3Q8N328 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.4■□□□□ 0.38
PGBD3Q8N328 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.4■□□□□ 0.38
PGBD3Q8N328 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.4■□□□□ 0.38
PGBD3Q8N328 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PGBD3Q8N328 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PGBD3Q8N328 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PGBD3Q8N328 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
PGBD3Q8N328 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 TSEN15P1-201ENST00000423257 515 ntBASIC17.39■□□□□ 0.37
PGBD3Q8N328 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 AL513480.1-201ENST00000451731 511 ntBASIC17.39■□□□□ 0.37
PGBD3Q8N328 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 LINC00896-202ENST00000609602 2128 ntBASIC17.39■□□□□ 0.37
PGBD3Q8N328 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PGBD3Q8N328 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PGBD3Q8N328 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 LTB4R2-202ENST00000528054 3092 ntBASIC17.38■□□□□ 0.37
PGBD3Q8N328 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 ACTG1P4-201ENST00000425123 1122 ntBASIC17.38■□□□□ 0.37
PGBD3Q8N328 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 AP000344.2-201ENST00000512987 629 ntBASIC17.38■□□□□ 0.37
PGBD3Q8N328 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 AC068137.2-201ENST00000605408 478 ntBASIC17.38■□□□□ 0.37
PGBD3Q8N328 AC093028.1-201ENST00000622998 982 ntBASIC17.38■□□□□ 0.37
PGBD3Q8N328 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 AL590787.1-201ENST00000568856 1315 ntBASIC17.38■□□□□ 0.37
PGBD3Q8N328 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.38■□□□□ 0.37
PGBD3Q8N328 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PGBD3Q8N328 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PGBD3Q8N328 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PGBD3Q8N328 AC134043.2-201ENST00000624206 2238 ntBASIC17.37■□□□□ 0.37
PGBD3Q8N328 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.37■□□□□ 0.37
PGBD3Q8N328 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PGBD3Q8N328 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PGBD3Q8N328 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PGBD3Q8N328 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms