Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 GPR182-203ENST00000622922 591 ntBASIC21.59■■□□□ 1.05
PROM2Q8N271 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PROM2Q8N271 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
PROM2Q8N271 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PROM2Q8N271 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PROM2Q8N271 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.59■■□□□ 1.05
PROM2Q8N271 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PROM2Q8N271 CROCCP3-202ENST00000420820 1947 ntBASIC21.59■■□□□ 1.05
PROM2Q8N271 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PROM2Q8N271 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.59■■□□□ 1.05
PROM2Q8N271 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.58■■□□□ 1.05
PROM2Q8N271 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.58■■□□□ 1.05
PROM2Q8N271 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.58■■□□□ 1.05
PROM2Q8N271 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PROM2Q8N271 SPDYE19P-201ENST00000338590 713 ntBASIC21.58■■□□□ 1.05
PROM2Q8N271 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.58■■□□□ 1.05
PROM2Q8N271 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC21.58■■□□□ 1.05
PROM2Q8N271 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.58■■□□□ 1.05
PROM2Q8N271 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.58■■□□□ 1.05
PROM2Q8N271 TMEM14DP-201ENST00000422205 345 ntBASIC21.58■■□□□ 1.05
PROM2Q8N271 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.58■■□□□ 1.05
PROM2Q8N271 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.58■■□□□ 1.05
PROM2Q8N271 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.58■■□□□ 1.05
PROM2Q8N271 ZNF890P-202ENST00000530367 1156 ntBASIC21.58■■□□□ 1.05
PROM2Q8N271 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.58■■□□□ 1.05
PROM2Q8N271 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PROM2Q8N271 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PROM2Q8N271 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PROM2Q8N271 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.58■■□□□ 1.04
PROM2Q8N271 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PROM2Q8N271 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.57■■□□□ 1.04
PROM2Q8N271 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.57■■□□□ 1.04
PROM2Q8N271 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PROM2Q8N271 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 AC010740.1-201ENST00000417035 684 ntBASIC21.57■■□□□ 1.04
PROM2Q8N271 ARL4AP4-201ENST00000434170 518 ntBASIC21.57■■□□□ 1.04
PROM2Q8N271 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.57■■□□□ 1.04
PROM2Q8N271 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.57■■□□□ 1.04
PROM2Q8N271 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.57■■□□□ 1.04
PROM2Q8N271 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.57■■□□□ 1.04
PROM2Q8N271 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.57■■□□□ 1.04
PROM2Q8N271 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.57■■□□□ 1.04
PROM2Q8N271 AL589739.1-201ENST00000607720 493 ntBASIC21.57■■□□□ 1.04
PROM2Q8N271 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.57■■□□□ 1.04
PROM2Q8N271 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PROM2Q8N271 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
PROM2Q8N271 BTBD7P1-201ENST00000447253 1453 ntBASIC21.57■■□□□ 1.04
PROM2Q8N271 CETN4P-206ENST00000642099 2168 ntBASIC21.57■■□□□ 1.04
PROM2Q8N271 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PROM2Q8N271 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.57■■□□□ 1.04
PROM2Q8N271 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PROM2Q8N271 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PROM2Q8N271 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.56■■□□□ 1.04
PROM2Q8N271 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.56■■□□□ 1.04
PROM2Q8N271 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PROM2Q8N271 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PROM2Q8N271 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.56■■□□□ 1.04
PROM2Q8N271 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.56■■□□□ 1.04
PROM2Q8N271 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.56■■□□□ 1.04
PROM2Q8N271 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 SPDYE18-201ENST00000510091 1050 ntBASIC21.56■■□□□ 1.04
PROM2Q8N271 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PROM2Q8N271 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC21.56■■□□□ 1.04
PROM2Q8N271 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 AL133215.2-201ENST00000609242 977 ntBASIC21.56■■□□□ 1.04
PROM2Q8N271 OR13I1P-201ENST00000609811 1264 ntBASIC21.56■■□□□ 1.04
PROM2Q8N271 MIR6787-201ENST00000616675 61 ntBASIC21.56■■□□□ 1.04
PROM2Q8N271 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.56■■□□□ 1.04
PROM2Q8N271 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 REXO1L9P-201ENST00000604264 2108 ntBASIC21.56■■□□□ 1.04
PROM2Q8N271 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PROM2Q8N271 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PROM2Q8N271 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.55■■□□□ 1.04
PROM2Q8N271 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms