Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 AP002414.1-201ENST00000391405 1147 ntBASIC15.93■□□□□ 0.14
BEST3Q8N1M1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 UPF3AP3-201ENST00000420996 769 ntBASIC15.93■□□□□ 0.14
BEST3Q8N1M1 ACTG1P4-201ENST00000425123 1122 ntBASIC15.93■□□□□ 0.14
BEST3Q8N1M1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 AL139327.4-201ENST00000612362 153 ntBASIC15.93■□□□□ 0.14
BEST3Q8N1M1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BEST3Q8N1M1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 MRPL20P1-201ENST00000400819 433 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 AC004832.2-201ENST00000426397 482 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 GPX1P2-201ENST00000429271 606 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 PRSS29P-201ENST00000440800 595 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 DNAJB3-201ENST00000446806 729 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 MIR3687-2-201ENST00000577708 61 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 MIR3687-1-201ENST00000614492 61 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 AC006116.8-202ENST00000587620 1550 ntBASIC15.92■□□□□ 0.14
BEST3Q8N1M1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST3Q8N1M1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 LINC00304-203ENST00000565008 1864 ntBASIC15.91■□□□□ 0.14
BEST3Q8N1M1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 RPSAP43-201ENST00000402237 625 ntBASIC15.91■□□□□ 0.14
BEST3Q8N1M1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 HCG4B-203ENST00000450128 991 ntBASIC15.91■□□□□ 0.14
BEST3Q8N1M1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 AC018845.2-201ENST00000568326 409 ntBASIC15.91■□□□□ 0.14
BEST3Q8N1M1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 AC010654.1-201ENST00000615722 808 ntBASIC15.91■□□□□ 0.14
BEST3Q8N1M1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST3Q8N1M1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms