Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 KLF2P3-201ENST00000451977 1087 ntBASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 RARRES2P8-201ENST00000566335 367 ntBASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 AL139327.4-201ENST00000612362 153 ntBASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TMEFF1Q8IYR6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 FLJ13224-201ENST00000313737 1514 ntBASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 FZD10-202ENST00000539839 3282 ntBASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 AC005034.1-201ENST00000426657 489 ntBASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 AL512356.2-201ENST00000546955 174 ntBASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 MIR4515-201ENST00000584082 81 ntBASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 AP001059.3-201ENST00000619053 235 ntBASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 AL035252.4-201ENST00000624174 288 ntBASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEFF1Q8IYR6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEFF1Q8IYR6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEFF1Q8IYR6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEFF1Q8IYR6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.96■□□□□ 0.3
TMEFF1Q8IYR6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 GPS2P2-201ENST00000430745 888 ntBASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 SPCS2P4-201ENST00000436160 681 ntBASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 TSPY16P-201ENST00000449843 468 ntBASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 IGHV3-62-201ENST00000520057 340 ntBASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.95■□□□□ 0.3
TMEFF1Q8IYR6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms