Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 AL133373.2-201ENST00000623187 2828 ntBASIC18.47■□□□□ 0.55
HERC6Q8IVU3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SPDYE7P-202ENST00000420373 878 ntBASIC18.47■□□□□ 0.55
HERC6Q8IVU3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SPDYE14P-201ENST00000442619 822 ntBASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 LINC01225-203ENST00000563550 1244 ntBASIC18.47■□□□□ 0.55
HERC6Q8IVU3 AL158211.3-201ENST00000607385 239 ntBASIC18.47■□□□□ 0.55
HERC6Q8IVU3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 UXT-AS1-201ENST00000590504 1525 ntBASIC18.47■□□□□ 0.55
HERC6Q8IVU3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC6Q8IVU3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.46■□□□□ 0.55
HERC6Q8IVU3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.46■□□□□ 0.55
HERC6Q8IVU3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 KRT8P23-201ENST00000560090 1207 ntBASIC18.46■□□□□ 0.55
HERC6Q8IVU3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.46■□□□□ 0.55
HERC6Q8IVU3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
HERC6Q8IVU3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HERC6Q8IVU3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms