Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 KRT18P27-201ENST00000427733 1299 ntBASIC16.42■□□□□ 0.22
RAB43Q86YS6 SIGLEC30P-201ENST00000455569 941 ntBASIC16.42■□□□□ 0.22
RAB43Q86YS6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 PGAM5P1-201ENST00000518923 814 ntBASIC16.42■□□□□ 0.22
RAB43Q86YS6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 AL118508.1-201ENST00000613502 2345 ntBASIC16.42■□□□□ 0.22
RAB43Q86YS6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 DDX43P3-201ENST00000441064 443 ntBASIC16.41■□□□□ 0.22
RAB43Q86YS6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 DNAJB3-201ENST00000446806 729 ntBASIC16.41■□□□□ 0.22
RAB43Q86YS6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 IGHV3-52-201ENST00000519770 353 ntBASIC16.41■□□□□ 0.22
RAB43Q86YS6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 NCF1C-201ENST00000438382 1427 ntBASIC16.41■□□□□ 0.22
RAB43Q86YS6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 AC108860.2-201ENST00000562760 2183 ntBASIC16.41■□□□□ 0.22
RAB43Q86YS6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB43Q86YS6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB43Q86YS6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 AC009947.1-201ENST00000444350 727 ntBASIC16.4■□□□□ 0.22
RAB43Q86YS6 AC108751.1-201ENST00000490852 363 ntBASIC16.4■□□□□ 0.22
RAB43Q86YS6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 NKILA-202ENST00000614771 2598 ntBASIC16.4■□□□□ 0.22
RAB43Q86YS6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms