Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 ACTG1P4-201ENST00000425123 1122 ntBASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 AC139887.3-201ENST00000568585 713 ntBASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 AL139424.1-201ENST00000607572 797 ntBASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 AC004706.3-202ENST00000621574 984 ntBASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB11FIP4Q86YS3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 AC009053.2-201ENST00000563701 2365 ntBASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 RNA5SP419-201ENST00000515908 135 ntBASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11FIP4Q86YS3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 AL031284.1-201ENST00000419297 478 ntBASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 AC079776.4-201ENST00000511039 504 ntBASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 AL589182.2-201ENST00000619332 1049 ntBASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 AD000864.1-201ENST00000624076 2295 ntBASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB11FIP4Q86YS3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB11FIP4Q86YS3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB11FIP4Q86YS3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB11FIP4Q86YS3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RAB11FIP4Q86YS3 FRMD8P1-201ENST00000440433 1524 ntBASIC20.08■□□□□ 0.81
RAB11FIP4Q86YS3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB11FIP4Q86YS3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms