Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 RHOQP1-201ENST00000555758 579 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 RPSAP52-203ENST00000622976 1023 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 TUBB1P2-201ENST00000422712 1306 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 TUBB1P1-201ENST00000503144 1300 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 AC046185.3-201ENST00000623228 1824 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 FZD10-202ENST00000539839 3282 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 MIR3909-201ENST00000579518 119 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 TMEM261P1-201ENST00000604899 340 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 SLC22A20-204ENST00000530038 1673 ntBASIC14.24□□□□□ -0.13
CSMD2Q7Z408 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 CDC14C-201ENST00000428251 1719 ntBASIC14.24□□□□□ -0.13
CSMD2Q7Z408 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 AL080243.2-201ENST00000418783 582 ntBASIC14.24□□□□□ -0.13
CSMD2Q7Z408 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 ACTBP11-201ENST00000436287 1126 ntBASIC14.24□□□□□ -0.13
CSMD2Q7Z408 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 AP005482.1-201ENST00000563722 1273 ntBASIC14.24□□□□□ -0.13
CSMD2Q7Z408 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD2Q7Z408 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 SPDYE19P-201ENST00000338590 713 ntBASIC14.23□□□□□ -0.13
CSMD2Q7Z408 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 SLC7A15P-201ENST00000424028 1363 ntBASIC14.23□□□□□ -0.13
CSMD2Q7Z408 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD2Q7Z408 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms