Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 GPR89P-201ENST00000407924 1495 ntBASIC15.81■□□□□ 0.12
ZNF550Q7Z398 SPDYE21P-201ENST00000413323 827 ntBASIC15.81■□□□□ 0.12
ZNF550Q7Z398 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF550Q7Z398 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 SIGLEC16-201ENST00000599858 1437 ntBASIC15.8■□□□□ 0.12
ZNF550Q7Z398 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 ACTG1P4-201ENST00000425123 1122 ntBASIC15.8■□□□□ 0.12
ZNF550Q7Z398 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 AC079776.4-201ENST00000511039 504 ntBASIC15.8■□□□□ 0.12
ZNF550Q7Z398 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 AP002469.2-201ENST00000531724 424 ntBASIC15.8■□□□□ 0.12
ZNF550Q7Z398 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 AL121912.1-201ENST00000603683 238 ntBASIC15.8■□□□□ 0.12
ZNF550Q7Z398 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF550Q7Z398 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 AC092053.1-201ENST00000605787 1936 ntBASIC15.79■□□□□ 0.12
ZNF550Q7Z398 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.79■□□□□ 0.12
ZNF550Q7Z398 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF550Q7Z398 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms