Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 AP002383.4-201ENST00000442518 975 ntBASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 AC079602.3-201ENST00000623931 403 ntBASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 AC112497.1-201ENST00000624824 639 ntBASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXR1Q6PIV2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 TSPY22P-201ENST00000427496 604 ntBASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 LINC00265-3P-201ENST00000447588 903 ntBASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 KRT8P26-201ENST00000534154 1276 ntBASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 AL136038.4-201ENST00000603606 1261 ntBASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 IFNL4P1-201ENST00000607083 540 ntBASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXR1Q6PIV2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 KRT8P10-201ENST00000450021 1447 ntBASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 CHCHD2P8-201ENST00000429873 447 ntBASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 AL732292.2-201ENST00000609649 430 ntBASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 AC092364.2-201ENST00000596710 2692 ntBASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 AC093010.1-201ENST00000473625 1624 ntBASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXR1Q6PIV2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
FOXR1Q6PIV2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
FOXR1Q6PIV2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
FOXR1Q6PIV2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
FOXR1Q6PIV2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms