Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
C11orf88Q6PI97 AL603756.1-201ENST00000606511 2163 ntBASIC15.02■□□□□ -0
C11orf88Q6PI97 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
C11orf88Q6PI97 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.02■□□□□ -0
C11orf88Q6PI97 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.02■□□□□ -0
C11orf88Q6PI97 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
C11orf88Q6PI97 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.02■□□□□ -0
C11orf88Q6PI97 LINC00554-201ENST00000564841 3011 ntBASIC15.02■□□□□ -0
C11orf88Q6PI97 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.02■□□□□ -0
C11orf88Q6PI97 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
C11orf88Q6PI97 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.02■□□□□ -0
C11orf88Q6PI97 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.02■□□□□ -0
C11orf88Q6PI97 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
C11orf88Q6PI97 AC008622.2-201ENST00000617006 1229 ntBASIC15.02■□□□□ -0
C11orf88Q6PI97 AL121956.5-201ENST00000625261 221 ntBASIC15.02■□□□□ -0
C11orf88Q6PI97 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
C11orf88Q6PI97 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 KRT8P50-201ENST00000562022 1438 ntBASIC15.01□□□□□ -0.01
C11orf88Q6PI97 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
C11orf88Q6PI97 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15□□□□□ -0.01
C11orf88Q6PI97 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
C11orf88Q6PI97 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 AC022898.2-201ENST00000616822 1312 ntBASIC15□□□□□ -0.01
C11orf88Q6PI97 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15□□□□□ -0.01
C11orf88Q6PI97 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15□□□□□ -0.01
C11orf88Q6PI97 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15□□□□□ -0.01
C11orf88Q6PI97 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms