Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NUS1P1-201ENST00000446295 882 ntBASIC15.63■□□□□ 0.09
NIPAL3Q6P499 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 IGHV3-52-201ENST00000519770 353 ntBASIC15.63■□□□□ 0.09
NIPAL3Q6P499 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 AC111152.3-201ENST00000569699 673 ntBASIC15.63■□□□□ 0.09
NIPAL3Q6P499 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NIPAL3Q6P499 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 AL603756.1-201ENST00000606511 2163 ntBASIC15.62■□□□□ 0.09
NIPAL3Q6P499 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 AL591684.3-201ENST00000605187 298 ntBASIC15.62■□□□□ 0.09
NIPAL3Q6P499 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 AC012313.10-201ENST00000623509 926 ntBASIC15.62■□□□□ 0.09
NIPAL3Q6P499 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.62■□□□□ 0.09
NIPAL3Q6P499 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 MYCLP1-201ENST00000372451 1075 ntBASIC15.61■□□□□ 0.09
NIPAL3Q6P499 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 KRT16P4-201ENST00000453883 522 ntBASIC15.61■□□□□ 0.09
NIPAL3Q6P499 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.61■□□□□ 0.09
NIPAL3Q6P499 MIR5100-201ENST00000579544 119 ntBASIC15.61■□□□□ 0.09
NIPAL3Q6P499 CLEC4GP1-201ENST00000596555 870 ntBASIC15.61■□□□□ 0.09
NIPAL3Q6P499 AC019129.2-201ENST00000609837 1235 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms