Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 AC004233.3-201ENST00000607794 1269 ntBASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 SNX33P1-201ENST00000592116 1762 ntBASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 RPL37AP1-201ENST00000412502 279 ntBASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 SNX29P1-201ENST00000548357 1007 ntBASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 AL079307.3-201ENST00000556114 283 ntBASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 MIR6805-201ENST00000615055 62 ntBASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13DQ5THJ4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
VPS13DQ5THJ4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
VPS13DQ5THJ4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
VPS13DQ5THJ4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AC112492.5-201ENST00000421897 457 ntBASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AL162274.1-201ENST00000617191 1098 ntBASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 MIR4525-201ENST00000580000 75 ntBASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 RPSAP52-203ENST00000622976 1023 ntBASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 IGHV3-71-201ENST00000523324 359 ntBASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AC105021.1-202ENST00000570572 669 ntBASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13DQ5THJ4 AC087499.5-201ENST00000452760 1342 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms