Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 AC009336.1-201ENST00000608941 1553 ntBASIC16.7■□□□□ 0.26
SGO1Q5FBB7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 BNIP3P18-201ENST00000593976 575 ntBASIC16.7■□□□□ 0.26
SGO1Q5FBB7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 AC092119.3-201ENST00000612618 583 ntBASIC16.7■□□□□ 0.26
SGO1Q5FBB7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 AC105020.1-201ENST00000435356 2205 ntBASIC16.7■□□□□ 0.26
SGO1Q5FBB7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGO1Q5FBB7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGO1Q5FBB7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AC104819.1-201ENST00000504587 486 ntBASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AC069148.1-201ENST00000608741 768 ntBASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms