Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CKS1BP61024 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS1BP61024 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 KRT18P23-201ENST00000435622 1283 ntBASIC12.08□□□□□ -0.48
CKS1BP61024 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CKS1BP61024 AC097488.1-201ENST00000507834 756 ntBASIC12.08□□□□□ -0.48
CKS1BP61024 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS1BP61024 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS1BP61024 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS1BP61024 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.08□□□□□ -0.48
CKS1BP61024 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.08□□□□□ -0.48
CKS1BP61024 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.08□□□□□ -0.48
CKS1BP61024 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CKS1BP61024 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 AC006116.8-202ENST00000587620 1550 ntBASIC12.08□□□□□ -0.48
CKS1BP61024 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CKS1BP61024 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.08□□□□□ -0.48
CKS1BP61024 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CKS1BP61024 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CKS1BP61024 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 AL671710.1-201ENST00000610245 2349 ntBASIC12.08□□□□□ -0.48
CKS1BP61024 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
CKS1BP61024 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CKS1BP61024 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS1BP61024 AC087386.2-201ENST00000623212 4637 ntBASIC12.07□□□□□ -0.48
CKS1BP61024 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS1BP61024 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CKS1BP61024 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 AC097376.2-205ENST00000610159 5334 ntBASIC12.07□□□□□ -0.48
CKS1BP61024 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
CKS1BP61024 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CKS1BP61024 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CKS1BP61024 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS1BP61024 FAM197Y1-201ENST00000421178 764 ntBASIC12.07□□□□□ -0.48
CKS1BP61024 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CKS1BP61024 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 AC128676.1-201ENST00000454392 318 ntBASIC12.07□□□□□ -0.48
CKS1BP61024 RPPH1-201ENST00000516869 333 ntBASIC12.07□□□□□ -0.48
CKS1BP61024 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CKS1BP61024 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.07□□□□□ -0.48
CKS1BP61024 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 AC093010.1-201ENST00000473625 1624 ntBASIC12.07□□□□□ -0.48
CKS1BP61024 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CKS1BP61024 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS1BP61024 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CKS1BP61024 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms