Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIPPLY3P57055 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIPPLY3P57055 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 FXNP2-201ENST00000411625 547 ntBASIC14.21□□□□□ -0.13
RIPPLY3P57055 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 FAM58DP-201ENST00000428076 619 ntBASIC14.21□□□□□ -0.13
RIPPLY3P57055 AC092580.3-201ENST00000430932 139 ntBASIC14.21□□□□□ -0.13
RIPPLY3P57055 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 AC019129.2-201ENST00000609837 1235 ntBASIC14.21□□□□□ -0.13
RIPPLY3P57055 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RIPPLY3P57055 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.21□□□□□ -0.13
RIPPLY3P57055 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RIPPLY3P57055 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIPPLY3P57055 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIPPLY3P57055 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
RIPPLY3P57055 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIPPLY3P57055 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.21□□□□□ -0.14
RIPPLY3P57055 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RIPPLY3P57055 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIPPLY3P57055 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIPPLY3P57055 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIPPLY3P57055 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RIPPLY3P57055 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RIPPLY3P57055 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RIPPLY3P57055 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 AL691432.2-201ENST00000607222 2038 ntBASIC14.2□□□□□ -0.14
RIPPLY3P57055 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 AC004817.3-201ENST00000602957 2129 ntBASIC14.2□□□□□ -0.14
RIPPLY3P57055 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 LDHBP1-201ENST00000455730 1119 ntBASIC14.2□□□□□ -0.14
RIPPLY3P57055 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 Z82202.1-201ENST00000623446 1880 ntBASIC14.2□□□□□ -0.14
RIPPLY3P57055 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RIPPLY3P57055 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIPPLY3P57055 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.19□□□□□ -0.14
RIPPLY3P57055 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 AC046158.3-201ENST00000624947 2558 ntBASIC14.19□□□□□ -0.14
RIPPLY3P57055 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms