Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK1P53667 AC141586.5-201ENST00000624546 2050 ntBASIC16.9■□□□□ 0.3
LIMK1P53667 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK1P53667 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK1P53667 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LIMK1P53667 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK1P53667 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK1P53667 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
LIMK1P53667 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
LIMK1P53667 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.89■□□□□ 0.3
LIMK1P53667 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LIMK1P53667 GMCL1P1-201ENST00000463439 1581 ntBASIC16.89■□□□□ 0.3
LIMK1P53667 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LIMK1P53667 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
LIMK1P53667 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LIMK1P53667 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LIMK1P53667 GPS2P2-201ENST00000430745 888 ntBASIC16.89■□□□□ 0.29
LIMK1P53667 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LIMK1P53667 AC079140.1-201ENST00000508039 487 ntBASIC16.89■□□□□ 0.29
LIMK1P53667 AL596325.1-201ENST00000563991 1082 ntBASIC16.89■□□□□ 0.29
LIMK1P53667 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.89■□□□□ 0.29
LIMK1P53667 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.89■□□□□ 0.29
LIMK1P53667 ACTL9-202ENST00000612068 1252 ntBASIC16.89■□□□□ 0.29
LIMK1P53667 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LIMK1P53667 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LIMK1P53667 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LIMK1P53667 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
LIMK1P53667 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.89■□□□□ 0.29
LIMK1P53667 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LIMK1P53667 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.88■□□□□ 0.29
LIMK1P53667 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 AC124067.4-201ENST00000519691 2379 ntBASIC16.88■□□□□ 0.29
LIMK1P53667 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LIMK1P53667 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 SPDYE7P-202ENST00000420373 878 ntBASIC16.88■□□□□ 0.29
LIMK1P53667 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.88■□□□□ 0.29
LIMK1P53667 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 FAM58DP-201ENST00000428076 619 ntBASIC16.88■□□□□ 0.29
LIMK1P53667 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LIMK1P53667 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.88■□□□□ 0.29
LIMK1P53667 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.88■□□□□ 0.29
LIMK1P53667 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.88■□□□□ 0.29
LIMK1P53667 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.88■□□□□ 0.29
LIMK1P53667 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.88■□□□□ 0.29
LIMK1P53667 AL390754.1-201ENST00000619088 582 ntBASIC16.88■□□□□ 0.29
LIMK1P53667 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LIMK1P53667 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.88■□□□□ 0.29
LIMK1P53667 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LIMK1P53667 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LIMK1P53667 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK1P53667 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.87■□□□□ 0.29
LIMK1P53667 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK1P53667 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LIMK1P53667 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.87■□□□□ 0.29
LIMK1P53667 AIRN-201ENST00000601203 4374 ntBASIC16.87■□□□□ 0.29
LIMK1P53667 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.87■□□□□ 0.29
LIMK1P53667 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LIMK1P53667 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK1P53667 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms