Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF144AP50876 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 AC092068.3-201ENST00000587894 2016 ntBASIC15.97■□□□□ 0.15
RNF144AP50876 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 AC106886.4-201ENST00000623557 2502 ntBASIC15.97■□□□□ 0.15
RNF144AP50876 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
RNF144AP50876 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF144AP50876 PMPCAP1-201ENST00000508114 1576 ntBASIC15.96■□□□□ 0.15
RNF144AP50876 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF144AP50876 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.96■□□□□ 0.15
RNF144AP50876 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF144AP50876 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF144AP50876 UBALD1-205ENST00000590891 2641 ntBASIC15.96■□□□□ 0.15
RNF144AP50876 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF144AP50876 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF144AP50876 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF144AP50876 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF144AP50876 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RNF144AP50876 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF144AP50876 KRT18P31-201ENST00000506277 1292 ntBASIC15.96■□□□□ 0.15
RNF144AP50876 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF144AP50876 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.96■□□□□ 0.15
RNF144AP50876 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF144AP50876 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF144AP50876 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF144AP50876 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF144AP50876 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF144AP50876 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RNF144AP50876 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF144AP50876 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF144AP50876 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RNF144AP50876 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF144AP50876 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF144AP50876 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF144AP50876 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RNF144AP50876 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
RNF144AP50876 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF144AP50876 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 AC003669.1-201ENST00000334569 611 ntBASIC15.95■□□□□ 0.14
RNF144AP50876 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF144AP50876 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF144AP50876 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF144AP50876 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RNF144AP50876 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF144AP50876 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF144AP50876 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
RNF144AP50876 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF144AP50876 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF144AP50876 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.94■□□□□ 0.14
RNF144AP50876 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms