Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.12■□□□□ 0.33
CSNK1DP48730 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
CSNK1DP48730 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1DP48730 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
CSNK1DP48730 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1DP48730 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1DP48730 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1DP48730 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1DP48730 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSNK1DP48730 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1DP48730 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1DP48730 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1DP48730 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1DP48730 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1DP48730 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1DP48730 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1DP48730 HCG4-201ENST00000418983 998 ntBASIC17.11■□□□□ 0.33
CSNK1DP48730 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1DP48730 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.11■□□□□ 0.33
CSNK1DP48730 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
CSNK1DP48730 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CSNK1DP48730 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.11■□□□□ 0.33
CSNK1DP48730 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CSNK1DP48730 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.11■□□□□ 0.33
CSNK1DP48730 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.11■□□□□ 0.33
CSNK1DP48730 AL645728.2-201ENST00000641974 660 ntBASIC17.11■□□□□ 0.33
CSNK1DP48730 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1DP48730 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1DP48730 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1DP48730 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1DP48730 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1DP48730 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CSNK1DP48730 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CSNK1DP48730 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1DP48730 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CSNK1DP48730 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK1DP48730 AL513480.1-201ENST00000451731 511 ntBASIC17.1■□□□□ 0.33
CSNK1DP48730 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CSNK1DP48730 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK1DP48730 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.1■□□□□ 0.33
CSNK1DP48730 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.1■□□□□ 0.33
CSNK1DP48730 MPDU1-223ENST00000582151 728 ntBASIC17.1■□□□□ 0.33
CSNK1DP48730 MIR4515-201ENST00000584082 81 ntBASIC17.1■□□□□ 0.33
CSNK1DP48730 AC004877.2-201ENST00000623941 599 ntBASIC17.1■□□□□ 0.33
CSNK1DP48730 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSNK1DP48730 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSNK1DP48730 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1DP48730 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 AC004832.2-201ENST00000426397 482 ntBASIC17.09■□□□□ 0.33
CSNK1DP48730 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.09■□□□□ 0.33
CSNK1DP48730 AP002490.2-201ENST00000524791 560 ntBASIC17.09■□□□□ 0.33
CSNK1DP48730 AC018845.2-201ENST00000568326 409 ntBASIC17.09■□□□□ 0.33
CSNK1DP48730 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 MIR4492-201ENST00000581627 80 ntBASIC17.09■□□□□ 0.33
CSNK1DP48730 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 AC013467.2-201ENST00000605472 835 ntBASIC17.09■□□□□ 0.33
CSNK1DP48730 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.09■□□□□ 0.33
CSNK1DP48730 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 AL121761.2-201ENST00000598007 1648 ntBASIC17.09■□□□□ 0.33
CSNK1DP48730 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.09■□□□□ 0.33
CSNK1DP48730 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSNK1DP48730 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CSNK1DP48730 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms