Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1A1P48729 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1A1P48729 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CSNK1A1P48729 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CSNK1A1P48729 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CSNK1A1P48729 DUSP5P1-201ENST00000441325 1139 ntBASIC15.27■□□□□ 0.04
CSNK1A1P48729 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.27■□□□□ 0.04
CSNK1A1P48729 SART3-203ENST00000546611 1184 ntBASIC15.27■□□□□ 0.04
CSNK1A1P48729 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.27■□□□□ 0.04
CSNK1A1P48729 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.27■□□□□ 0.04
CSNK1A1P48729 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.27■□□□□ 0.04
CSNK1A1P48729 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.27■□□□□ 0.04
CSNK1A1P48729 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSNK1A1P48729 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1A1P48729 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1A1P48729 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.27■□□□□ 0.03
CSNK1A1P48729 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1A1P48729 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1A1P48729 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.27■□□□□ 0.03
CSNK1A1P48729 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1A1P48729 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1A1P48729 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CSNK1A1P48729 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 AC080080.1-201ENST00000625121 2420 ntBASIC15.26■□□□□ 0.03
CSNK1A1P48729 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.26■□□□□ 0.03
CSNK1A1P48729 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 AF238378.1-201ENST00000526806 358 ntBASIC15.26■□□□□ 0.03
CSNK1A1P48729 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSNK1A1P48729 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1A1P48729 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 UNC93B7-201ENST00000509439 705 ntBASIC15.25■□□□□ 0.03
CSNK1A1P48729 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 AC124947.2-201ENST00000547118 1133 ntBASIC15.25■□□□□ 0.03
CSNK1A1P48729 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 MTDHP4-201ENST00000600287 670 ntBASIC15.25■□□□□ 0.03
CSNK1A1P48729 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 AL589182.2-201ENST00000619332 1049 ntBASIC15.25■□□□□ 0.03
CSNK1A1P48729 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1A1P48729 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1A1P48729 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms