Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.15■□□□□ 0.5
BRCC3P46736 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.15■□□□□ 0.5
BRCC3P46736 MIR4515-201ENST00000584082 81 ntBASIC18.15■□□□□ 0.5
BRCC3P46736 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.15■□□□□ 0.5
BRCC3P46736 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.15■□□□□ 0.5
BRCC3P46736 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.15■□□□□ 0.5
BRCC3P46736 AL645728.2-201ENST00000641974 660 ntBASIC18.15■□□□□ 0.5
BRCC3P46736 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.15■□□□□ 0.5
BRCC3P46736 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BRCC3P46736 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BRCC3P46736 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
BRCC3P46736 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.15■□□□□ 0.5
BRCC3P46736 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BRCC3P46736 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BRCC3P46736 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRCC3P46736 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.14■□□□□ 0.5
BRCC3P46736 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.14■□□□□ 0.5
BRCC3P46736 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.14■□□□□ 0.5
BRCC3P46736 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BRCC3P46736 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
BRCC3P46736 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
BRCC3P46736 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
BRCC3P46736 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BRCC3P46736 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
BRCC3P46736 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 HMGA1P7-201ENST00000406908 502 ntBASIC18.14■□□□□ 0.49
BRCC3P46736 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.14■□□□□ 0.49
BRCC3P46736 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.14■□□□□ 0.49
BRCC3P46736 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.14■□□□□ 0.49
BRCC3P46736 AC112191.1-201ENST00000523689 701 ntBASIC18.14■□□□□ 0.49
BRCC3P46736 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
BRCC3P46736 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.14■□□□□ 0.49
BRCC3P46736 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.14■□□□□ 0.49
BRCC3P46736 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRCC3P46736 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.14■□□□□ 0.49
BRCC3P46736 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 PP12613-201ENST00000424958 2230 ntBASIC18.13■□□□□ 0.49
BRCC3P46736 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 AC004461.1-201ENST00000412461 403 ntBASIC18.13■□□□□ 0.49
BRCC3P46736 AC140658.5-201ENST00000438532 169 ntBASIC18.13■□□□□ 0.49
BRCC3P46736 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.13■□□□□ 0.49
BRCC3P46736 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.13■□□□□ 0.49
BRCC3P46736 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.13■□□□□ 0.49
BRCC3P46736 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.13■□□□□ 0.49
BRCC3P46736 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRCC3P46736 AC099522.2-201ENST00000607001 744 ntBASIC18.13■□□□□ 0.49
BRCC3P46736 AC105339.1-204ENST00000636249 355 ntBASIC18.13■□□□□ 0.49
BRCC3P46736 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms