Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
NCAPD3P42695 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
NCAPD3P42695 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 MYCLP2-201ENST00000449268 967 ntBASIC29.74■■■□□ 2.35
NCAPD3P42695 USP32P1-208ENST00000506594 1164 ntBASIC29.74■■■□□ 2.35
NCAPD3P42695 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC29.74■■■□□ 2.35
NCAPD3P42695 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC29.74■■■□□ 2.35
NCAPD3P42695 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC29.74■■■□□ 2.35
NCAPD3P42695 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
NCAPD3P42695 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC29.74■■■□□ 2.35
NCAPD3P42695 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC29.74■■■□□ 2.35
NCAPD3P42695 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC29.74■■■□□ 2.35
NCAPD3P42695 CD74-212ENST00000524315 584 ntTSL 5 BASIC29.74■■■□□ 2.35
NCAPD3P42695 USB1-203ENST00000539737 1212 ntTSL 2 BASIC29.74■■■□□ 2.35
NCAPD3P42695 MAX-210ENST00000555419 765 ntTSL 5 BASIC29.74■■■□□ 2.35
NCAPD3P42695 IGHV3OR16-16-201ENST00000563644 343 ntBASIC29.74■■■□□ 2.35
NCAPD3P42695 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC29.74■■■□□ 2.35
NCAPD3P42695 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NCAPD3P42695 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC29.74■■■□□ 2.35
NCAPD3P42695 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
NCAPD3P42695 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC29.73■■■□□ 2.35
NCAPD3P42695 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
NCAPD3P42695 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC29.73■■■□□ 2.35
NCAPD3P42695 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC29.73■■■□□ 2.35
NCAPD3P42695 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
NCAPD3P42695 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC29.73■■■□□ 2.35
NCAPD3P42695 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
NCAPD3P42695 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC29.73■■■□□ 2.35
NCAPD3P42695 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC29.73■■■□□ 2.35
NCAPD3P42695 WFDC1-204ENST00000613603 549 ntBASIC29.73■■■□□ 2.35
NCAPD3P42695 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC29.73■■■□□ 2.35
NCAPD3P42695 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCAPD3P42695 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC29.72■■■□□ 2.35
NCAPD3P42695 FOS-208ENST00000555686 1496 ntTSL 2 BASIC29.72■■■□□ 2.35
NCAPD3P42695 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC29.72■■■□□ 2.35
NCAPD3P42695 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC29.72■■■□□ 2.35
NCAPD3P42695 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC29.72■■■□□ 2.35
NCAPD3P42695 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NCAPD3P42695 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC29.72■■■□□ 2.35
NCAPD3P42695 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC29.72■■■□□ 2.35
NCAPD3P42695 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC29.72■■■□□ 2.35
NCAPD3P42695 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC29.72■■■□□ 2.35
NCAPD3P42695 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
NCAPD3P42695 CROCCP4-201ENST00000457096 498 ntBASIC29.72■■■□□ 2.35
NCAPD3P42695 AC123567.1-201ENST00000548294 1261 ntBASIC29.72■■■□□ 2.35
NCAPD3P42695 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
NCAPD3P42695 AC068587.10-201ENST00000641210 219 ntBASIC29.72■■■□□ 2.35
NCAPD3P42695 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC29.72■■■□□ 2.35
NCAPD3P42695 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NCAPD3P42695 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
NCAPD3P42695 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NCAPD3P42695 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
NCAPD3P42695 RPS19-201ENST00000221975 500 ntTSL 3 BASIC29.71■■■□□ 2.35
NCAPD3P42695 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
NCAPD3P42695 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC29.71■■■□□ 2.35
NCAPD3P42695 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC29.71■■■□□ 2.35
NCAPD3P42695 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NCAPD3P42695 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
NCAPD3P42695 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NCAPD3P42695 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
NCAPD3P42695 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
NCAPD3P42695 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC29.7■■■□□ 2.35
NCAPD3P42695 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
NCAPD3P42695 MEP1AP4-201ENST00000423244 1087 ntBASIC29.7■■■□□ 2.35
NCAPD3P42695 AC098859.1-201ENST00000502915 1238 ntBASIC29.7■■■□□ 2.35
NCAPD3P42695 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
NCAPD3P42695 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
NCAPD3P42695 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC29.7■■■□□ 2.35
NCAPD3P42695 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
NCAPD3P42695 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
NCAPD3P42695 TECR-220ENST00000600083 1204 ntTSL 2 BASIC29.7■■■□□ 2.35
NCAPD3P42695 AC093726.1-201ENST00000608064 963 ntBASIC29.7■■■□□ 2.35
NCAPD3P42695 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
NCAPD3P42695 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
NCAPD3P42695 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
NCAPD3P42695 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
NCAPD3P42695 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NCAPD3P42695 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
NCAPD3P42695 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC29.69■■■□□ 2.34
NCAPD3P42695 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC29.69■■■□□ 2.34
NCAPD3P42695 BCYRN1-201ENST00000418539 200 ntBASIC29.69■■■□□ 2.34
NCAPD3P42695 AL589987.1-201ENST00000453380 819 ntBASIC29.69■■■□□ 2.34
NCAPD3P42695 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
NCAPD3P42695 AL583810.1-201ENST00000553344 1045 ntBASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms