Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
USP6P35125 NOC2LP1-202ENST00000452600 2235 ntBASIC22.89■■□□□ 1.25
USP6P35125 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
USP6P35125 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
USP6P35125 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC22.89■■□□□ 1.25
USP6P35125 TSSK5P-201ENST00000423978 907 ntBASIC22.89■■□□□ 1.25
USP6P35125 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC22.89■■□□□ 1.25
USP6P35125 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC22.89■■□□□ 1.25
USP6P35125 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.89■■□□□ 1.25
USP6P35125 MIR4453-201ENST00000584019 89 ntBASIC22.89■■□□□ 1.25
USP6P35125 AC021097.1-201ENST00000607902 574 ntBASIC22.89■■□□□ 1.25
USP6P35125 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.89■■□□□ 1.25
USP6P35125 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.88■■□□□ 1.25
USP6P35125 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
USP6P35125 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
USP6P35125 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
USP6P35125 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.88■■□□□ 1.25
USP6P35125 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC22.88■■□□□ 1.25
USP6P35125 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
USP6P35125 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
USP6P35125 LINC02560-201ENST00000596379 459 ntBASIC22.88■■□□□ 1.25
USP6P35125 SPDYE12P-201ENST00000618416 771 ntBASIC22.88■■□□□ 1.25
USP6P35125 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
USP6P35125 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.88■■□□□ 1.25
USP6P35125 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
USP6P35125 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
USP6P35125 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
USP6P35125 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.88■■□□□ 1.25
USP6P35125 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.87■■□□□ 1.25
USP6P35125 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
USP6P35125 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.87■■□□□ 1.25
USP6P35125 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.87■■□□□ 1.25
USP6P35125 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC22.87■■□□□ 1.25
USP6P35125 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.87■■□□□ 1.25
USP6P35125 STARD13-205ENST00000439831 945 ntTSL 2 BASIC22.87■■□□□ 1.25
USP6P35125 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC22.87■■□□□ 1.25
USP6P35125 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC22.87■■□□□ 1.25
USP6P35125 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.87■■□□□ 1.25
USP6P35125 RARRES2P9-201ENST00000565168 469 ntBASIC22.87■■□□□ 1.25
USP6P35125 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
USP6P35125 AL390961.4-201ENST00000623958 2535 ntBASIC22.87■■□□□ 1.25
USP6P35125 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.86■■□□□ 1.25
USP6P35125 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.86■■□□□ 1.25
USP6P35125 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC22.86■■□□□ 1.25
USP6P35125 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
USP6P35125 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC22.86■■□□□ 1.25
USP6P35125 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.86■■□□□ 1.25
USP6P35125 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC22.86■■□□□ 1.25
USP6P35125 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.86■■□□□ 1.25
USP6P35125 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 AL035252.4-201ENST00000624174 288 ntBASIC22.86■■□□□ 1.25
USP6P35125 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 AL021920.2-201ENST00000624828 1351 ntBASIC22.86■■□□□ 1.25
USP6P35125 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
USP6P35125 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
USP6P35125 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
USP6P35125 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
USP6P35125 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
USP6P35125 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
USP6P35125 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.85■■□□□ 1.25
USP6P35125 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
USP6P35125 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC22.85■■□□□ 1.25
USP6P35125 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC22.85■■□□□ 1.25
USP6P35125 AC005225.4-201ENST00000557330 545 ntBASIC22.85■■□□□ 1.25
USP6P35125 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
USP6P35125 AC073592.8-201ENST00000624126 511 ntBASIC22.85■■□□□ 1.25
USP6P35125 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
USP6P35125 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
USP6P35125 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
USP6P35125 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
USP6P35125 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms