Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CPS1P31327 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
CPS1P31327 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CPS1P31327 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC23.86■■□□□ 1.41
CPS1P31327 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPS1P31327 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPS1P31327 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC23.86■■□□□ 1.41
CPS1P31327 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC23.85■■□□□ 1.41
CPS1P31327 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CPS1P31327 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.85■■□□□ 1.41
CPS1P31327 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
CPS1P31327 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC23.85■■□□□ 1.41
CPS1P31327 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC23.85■■□□□ 1.41
CPS1P31327 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.85■■□□□ 1.41
CPS1P31327 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CPS1P31327 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.85■■□□□ 1.41
CPS1P31327 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CPS1P31327 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
CPS1P31327 AL035456.1-201ENST00000456064 1369 ntBASIC23.85■■□□□ 1.41
CPS1P31327 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CPS1P31327 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.85■■□□□ 1.41
CPS1P31327 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPS1P31327 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CPS1P31327 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
CPS1P31327 ACTBP11-201ENST00000436287 1126 ntBASIC23.84■■□□□ 1.41
CPS1P31327 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC23.84■■□□□ 1.41
CPS1P31327 BNIP3P42-201ENST00000454982 569 ntBASIC23.84■■□□□ 1.41
CPS1P31327 AC135586.1-201ENST00000539323 574 ntBASIC23.84■■□□□ 1.41
CPS1P31327 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.84■■□□□ 1.41
CPS1P31327 BNIP3P29-201ENST00000598302 571 ntBASIC23.84■■□□□ 1.41
CPS1P31327 CHCHD2P3-201ENST00000603038 451 ntBASIC23.84■■□□□ 1.41
CPS1P31327 AC011447.5-201ENST00000616168 564 ntBASIC23.84■■□□□ 1.41
CPS1P31327 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPS1P31327 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.84■■□□□ 1.41
CPS1P31327 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CPS1P31327 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPS1P31327 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CPS1P31327 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC23.84■■□□□ 1.41
CPS1P31327 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPS1P31327 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC23.84■■□□□ 1.41
CPS1P31327 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC23.84■■□□□ 1.41
CPS1P31327 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPS1P31327 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPS1P31327 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPS1P31327 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPS1P31327 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC23.84■■□□□ 1.41
CPS1P31327 AC105233.2-201ENST00000523697 349 ntBASIC23.84■■□□□ 1.41
CPS1P31327 AF228730.5-201ENST00000530288 346 ntBASIC23.84■■□□□ 1.41
CPS1P31327 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC23.84■■□□□ 1.41
CPS1P31327 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
CPS1P31327 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPS1P31327 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPS1P31327 SLC22A20-204ENST00000530038 1673 ntBASIC23.83■■□□□ 1.41
CPS1P31327 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC23.83■■□□□ 1.41
CPS1P31327 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.83■■□□□ 1.41
CPS1P31327 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CPS1P31327 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CPS1P31327 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.83■■□□□ 1.41
CPS1P31327 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPS1P31327 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CPS1P31327 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPS1P31327 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.83■■□□□ 1.41
CPS1P31327 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPS1P31327 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPS1P31327 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC23.83■■□□□ 1.41
CPS1P31327 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC23.83■■□□□ 1.41
CPS1P31327 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC23.83■■□□□ 1.41
CPS1P31327 USB1-203ENST00000539737 1212 ntTSL 2 BASIC23.83■■□□□ 1.41
CPS1P31327 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC23.83■■□□□ 1.41
CPS1P31327 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC23.83■■□□□ 1.41
CPS1P31327 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
CPS1P31327 GPR182-203ENST00000622922 591 ntBASIC23.83■■□□□ 1.41
CPS1P31327 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CPS1P31327 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CPS1P31327 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CPS1P31327 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
CPS1P31327 AC020907.1-201ENST00000616460 1350 ntBASIC23.82■■□□□ 1.4
CPS1P31327 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPS1P31327 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.82■■□□□ 1.4
CPS1P31327 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC23.82■■□□□ 1.4
CPS1P31327 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CPS1P31327 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPS1P31327 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.82■■□□□ 1.4
CPS1P31327 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CPS1P31327 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CPS1P31327 GNAQP1-201ENST00000444815 1067 ntBASIC23.82■■□□□ 1.4
CPS1P31327 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.82■■□□□ 1.4
CPS1P31327 MTRF1LP2-201ENST00000506027 1122 ntBASIC23.82■■□□□ 1.4
CPS1P31327 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC23.82■■□□□ 1.4
CPS1P31327 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC23.82■■□□□ 1.4
CPS1P31327 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC23.82■■□□□ 1.4
CPS1P31327 MIR6775-201ENST00000617557 69 ntBASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms