Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TNFSF4P23510 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFSF4P23510 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 MRPL3P1-201ENST00000400109 1033 ntBASIC14.68□□□□□ -0.06
TNFSF4P23510 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFSF4P23510 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFSF4P23510 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TNFSF4P23510 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFSF4P23510 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TNFSF4P23510 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TNFSF4P23510 AC004706.3-202ENST00000621574 984 ntBASIC14.68□□□□□ -0.06
TNFSF4P23510 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TNFSF4P23510 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFSF4P23510 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFSF4P23510 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFSF4P23510 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TNFSF4P23510 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
TNFSF4P23510 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TNFSF4P23510 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFSF4P23510 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 AC067852.2-201ENST00000590513 2313 ntBASIC14.67□□□□□ -0.06
TNFSF4P23510 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TNFSF4P23510 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TNFSF4P23510 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFSF4P23510 FDX1P1-201ENST00000449115 551 ntBASIC14.67□□□□□ -0.06
TNFSF4P23510 AC136632.2-201ENST00000512891 861 ntBASIC14.67□□□□□ -0.06
TNFSF4P23510 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.67□□□□□ -0.06
TNFSF4P23510 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFSF4P23510 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFSF4P23510 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFSF4P23510 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFSF4P23510 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.67□□□□□ -0.06
TNFSF4P23510 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TNFSF4P23510 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFSF4P23510 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.67□□□□□ -0.06
TNFSF4P23510 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TNFSF4P23510 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFSF4P23510 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TNFSF4P23510 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TNFSF4P23510 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFSF4P23510 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TNFSF4P23510 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 AC012313.1-201ENST00000593393 3059 ntBASIC14.66□□□□□ -0.06
TNFSF4P23510 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFSF4P23510 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFSF4P23510 GPR89P-201ENST00000407924 1495 ntBASIC14.66□□□□□ -0.06
TNFSF4P23510 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFSF4P23510 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFSF4P23510 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFSF4P23510 AL353135.1-201ENST00000606729 504 ntBASIC14.66□□□□□ -0.06
TNFSF4P23510 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.66□□□□□ -0.06
TNFSF4P23510 AC148477.8-201ENST00000624298 468 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms