Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ITGA6P23229 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.98■□□□□ 0.95
ITGA6P23229 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.98■□□□□ 0.95
ITGA6P23229 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ITGA6P23229 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
ITGA6P23229 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.98■□□□□ 0.95
ITGA6P23229 AC093520.2-201ENST00000561830 333 ntBASIC20.98■□□□□ 0.95
ITGA6P23229 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.98■□□□□ 0.95
ITGA6P23229 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ITGA6P23229 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ITGA6P23229 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
ITGA6P23229 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.98■□□□□ 0.95
ITGA6P23229 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ITGA6P23229 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ITGA6P23229 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.97■□□□□ 0.95
ITGA6P23229 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
ITGA6P23229 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.97■□□□□ 0.95
ITGA6P23229 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.97■□□□□ 0.95
ITGA6P23229 AC023141.5-201ENST00000458585 616 ntBASIC20.97■□□□□ 0.95
ITGA6P23229 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.97■□□□□ 0.95
ITGA6P23229 FAM86C2P-203ENST00000528684 1004 ntBASIC20.97■□□□□ 0.95
ITGA6P23229 AL009183.1-201ENST00000603760 355 ntBASIC20.97■□□□□ 0.95
ITGA6P23229 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.97■□□□□ 0.95
ITGA6P23229 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.97■□□□□ 0.95
ITGA6P23229 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ITGA6P23229 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.97■□□□□ 0.95
ITGA6P23229 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ITGA6P23229 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITGA6P23229 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.97■□□□□ 0.95
ITGA6P23229 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ITGA6P23229 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ITGA6P23229 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ITGA6P23229 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.96■□□□□ 0.95
ITGA6P23229 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ITGA6P23229 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.96■□□□□ 0.95
ITGA6P23229 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 TFAMP1-201ENST00000412727 736 ntBASIC20.96■□□□□ 0.95
ITGA6P23229 SPDYE11-202ENST00000450699 704 ntBASIC20.96■□□□□ 0.95
ITGA6P23229 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.96■□□□□ 0.95
ITGA6P23229 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.96■□□□□ 0.95
ITGA6P23229 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.96■□□□□ 0.95
ITGA6P23229 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.96■□□□□ 0.95
ITGA6P23229 SPDYE9P-201ENST00000570642 692 ntBASIC20.96■□□□□ 0.95
ITGA6P23229 SPDYE10P-202ENST00000612005 668 ntBASIC20.96■□□□□ 0.95
ITGA6P23229 SPDYE8P-202ENST00000612377 668 ntBASIC20.96■□□□□ 0.95
ITGA6P23229 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITGA6P23229 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.96■□□□□ 0.95
ITGA6P23229 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ITGA6P23229 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.96■□□□□ 0.95
ITGA6P23229 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA6P23229 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA6P23229 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
ITGA6P23229 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ITGA6P23229 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.95■□□□□ 0.94
ITGA6P23229 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA6P23229 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA6P23229 AL627223.1-201ENST00000416693 442 ntBASIC20.95■□□□□ 0.94
ITGA6P23229 HCG4-201ENST00000418983 998 ntBASIC20.95■□□□□ 0.94
ITGA6P23229 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.95■□□□□ 0.94
ITGA6P23229 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA6P23229 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.95■□□□□ 0.94
ITGA6P23229 HLA-J-203ENST00000494367 1087 ntBASIC20.95■□□□□ 0.94
ITGA6P23229 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.95■□□□□ 0.94
ITGA6P23229 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.95■□□□□ 0.94
ITGA6P23229 AC243562.1-201ENST00000560672 389 ntBASIC20.95■□□□□ 0.94
ITGA6P23229 AL135744.1-201ENST00000565098 629 ntBASIC20.95■□□□□ 0.94
ITGA6P23229 RARRES2P8-201ENST00000566335 367 ntBASIC20.95■□□□□ 0.94
ITGA6P23229 AC091167.2-201ENST00000579581 588 ntBASIC20.95■□□□□ 0.94
ITGA6P23229 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
ITGA6P23229 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.95■□□□□ 0.94
ITGA6P23229 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 AC106028.4-201ENST00000614509 607 ntBASIC20.95■□□□□ 0.94
ITGA6P23229 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ITGA6P23229 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms