Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.82■□□□□ 0.28
BCKDHBP21953 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BCKDHBP21953 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.82■□□□□ 0.28
BCKDHBP21953 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BCKDHBP21953 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.82■□□□□ 0.28
BCKDHBP21953 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.82■□□□□ 0.28
BCKDHBP21953 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.82■□□□□ 0.28
BCKDHBP21953 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BCKDHBP21953 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BCKDHBP21953 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BCKDHBP21953 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BCKDHBP21953 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BCKDHBP21953 AC104581.1-202ENST00000635932 2618 ntBASIC16.82■□□□□ 0.28
BCKDHBP21953 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 AL353732.1-201ENST00000569618 1459 ntBASIC16.81■□□□□ 0.28
BCKDHBP21953 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.81■□□□□ 0.28
BCKDHBP21953 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.81■□□□□ 0.28
BCKDHBP21953 CRB3P1-201ENST00000449338 276 ntBASIC16.81■□□□□ 0.28
BCKDHBP21953 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.81■□□□□ 0.28
BCKDHBP21953 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BCKDHBP21953 MIR4453-201ENST00000584019 89 ntBASIC16.81■□□□□ 0.28
BCKDHBP21953 AL031055.1-201ENST00000606362 631 ntBASIC16.81■□□□□ 0.28
BCKDHBP21953 AC008267.7-201ENST00000624570 1194 ntBASIC16.81■□□□□ 0.28
BCKDHBP21953 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.81■□□□□ 0.28
BCKDHBP21953 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BCKDHBP21953 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.8■□□□□ 0.28
BCKDHBP21953 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.8■□□□□ 0.28
BCKDHBP21953 RNU1-129P-201ENST00000384064 167 ntBASIC16.8■□□□□ 0.28
BCKDHBP21953 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.8■□□□□ 0.28
BCKDHBP21953 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.8■□□□□ 0.28
BCKDHBP21953 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.8■□□□□ 0.28
BCKDHBP21953 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.8■□□□□ 0.28
BCKDHBP21953 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.8■□□□□ 0.28
BCKDHBP21953 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 U1.21-201ENST00000580816 167 ntBASIC16.8■□□□□ 0.28
BCKDHBP21953 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.8■□□□□ 0.28
BCKDHBP21953 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.8■□□□□ 0.28
BCKDHBP21953 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BCKDHBP21953 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BCKDHBP21953 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHBP21953 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
BCKDHBP21953 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHBP21953 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHBP21953 SLC22A20-204ENST00000530038 1673 ntBASIC16.79■□□□□ 0.28
BCKDHBP21953 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHBP21953 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHBP21953 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHBP21953 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BCKDHBP21953 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms