Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AL121912.1-201ENST00000603683 238 ntBASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AC025062.2-201ENST00000605477 670 ntBASIC17.31■□□□□ 0.36
HLA-DPA1P20036 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 FRMD8P1-201ENST00000440433 1524 ntBASIC17.31■□□□□ 0.36
HLA-DPA1P20036 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DPA1P20036 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 AL590787.1-201ENST00000568856 1315 ntBASIC17.3■□□□□ 0.36
HLA-DPA1P20036 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 AC004870.1-201ENST00000315132 882 ntBASIC17.3■□□□□ 0.36
HLA-DPA1P20036 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 LAGE3P1-201ENST00000425356 484 ntBASIC17.3■□□□□ 0.36
HLA-DPA1P20036 TPM4P1-201ENST00000436100 807 ntBASIC17.3■□□□□ 0.36
HLA-DPA1P20036 AC073648.2-201ENST00000510116 352 ntBASIC17.3■□□□□ 0.36
HLA-DPA1P20036 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DPA1P20036 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 PRORSD1P-202ENST00000563365 2154 ntBASIC17.29■□□□□ 0.36
HLA-DPA1P20036 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 FAAHP1-202ENST00000446499 1238 ntBASIC17.29■□□□□ 0.36
HLA-DPA1P20036 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 RN7SL510P-201ENST00000581311 263 ntBASIC17.29■□□□□ 0.36
HLA-DPA1P20036 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.29■□□□□ 0.36
HLA-DPA1P20036 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 AL121894.2-201ENST00000602977 491 ntBASIC17.29■□□□□ 0.36
HLA-DPA1P20036 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 AC004706.3-202ENST00000621574 984 ntBASIC17.29■□□□□ 0.36
HLA-DPA1P20036 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DPA1P20036 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DPA1P20036 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms