Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.82■□□□□ 0.76
ERCC3P19447 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.82■□□□□ 0.76
ERCC3P19447 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ERCC3P19447 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ERCC3P19447 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.82■□□□□ 0.76
ERCC3P19447 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.82■□□□□ 0.76
ERCC3P19447 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ERCC3P19447 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.82■□□□□ 0.76
ERCC3P19447 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ERCC3P19447 AC092902.6-201ENST00000641783 218 ntBASIC19.82■□□□□ 0.76
ERCC3P19447 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC3P19447 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ERCC3P19447 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC3P19447 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ERCC3P19447 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC3P19447 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC3P19447 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC3P19447 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.82■□□□□ 0.76
ERCC3P19447 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC3P19447 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC3P19447 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.81■□□□□ 0.76
ERCC3P19447 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.81■□□□□ 0.76
ERCC3P19447 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC3P19447 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ERCC3P19447 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ERCC3P19447 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC3P19447 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.81■□□□□ 0.76
ERCC3P19447 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC3P19447 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC3P19447 AP000344.2-201ENST00000512987 629 ntBASIC19.81■□□□□ 0.76
ERCC3P19447 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.81■□□□□ 0.76
ERCC3P19447 AC106028.4-201ENST00000614509 607 ntBASIC19.81■□□□□ 0.76
ERCC3P19447 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ERCC3P19447 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
ERCC3P19447 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 AC012313.1-201ENST00000593393 3059 ntBASIC19.81■□□□□ 0.76
ERCC3P19447 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC3P19447 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 AL135999.2-201ENST00000622438 1686 ntBASIC19.81■□□□□ 0.76
ERCC3P19447 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.81■□□□□ 0.76
ERCC3P19447 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC3P19447 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ERCC3P19447 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ERCC3P19447 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.8■□□□□ 0.76
ERCC3P19447 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.8■□□□□ 0.76
ERCC3P19447 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
ERCC3P19447 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
ERCC3P19447 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.8■□□□□ 0.76
ERCC3P19447 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.8■□□□□ 0.76
ERCC3P19447 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 FAM185BP-201ENST00000443595 716 ntBASIC19.8■□□□□ 0.76
ERCC3P19447 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.8■□□□□ 0.76
ERCC3P19447 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.8■□□□□ 0.76
ERCC3P19447 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.8■□□□□ 0.76
ERCC3P19447 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.8■□□□□ 0.76
ERCC3P19447 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.8■□□□□ 0.76
ERCC3P19447 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 AC046185.3-201ENST00000623228 1824 ntBASIC19.8■□□□□ 0.76
ERCC3P19447 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ERCC3P19447 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ERCC3P19447 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ERCC3P19447 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ERCC3P19447 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC3P19447 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms