Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL4P13236 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCL4P13236 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCL4P13236 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL4P13236 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL4P13236 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCL4P13236 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.07■□□□□ 0.16
CCL4P13236 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 MIR943-201ENST00000401286 94 ntBASIC16.07■□□□□ 0.16
CCL4P13236 AC055876.3-201ENST00000431496 288 ntBASIC16.07■□□□□ 0.16
CCL4P13236 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.07■□□□□ 0.16
CCL4P13236 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL4P13236 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 SLC25A6P5-201ENST00000435663 894 ntBASIC16.07■□□□□ 0.16
CCL4P13236 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.07■□□□□ 0.16
CCL4P13236 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.07■□□□□ 0.16
CCL4P13236 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 RNA5SP421-201ENST00000516864 134 ntBASIC16.07■□□□□ 0.16
CCL4P13236 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.07■□□□□ 0.16
CCL4P13236 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.07■□□□□ 0.16
CCL4P13236 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.07■□□□□ 0.16
CCL4P13236 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL4P13236 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCL4P13236 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 AC138649.4-201ENST00000612222 287 ntBASIC16.07■□□□□ 0.16
CCL4P13236 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL4P13236 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL4P13236 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL4P13236 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.07■□□□□ 0.16
CCL4P13236 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCL4P13236 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 SLC22A20-204ENST00000530038 1673 ntBASIC16.06■□□□□ 0.16
CCL4P13236 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCL4P13236 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCL4P13236 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCL4P13236 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL4P13236 KLF2P3-201ENST00000451977 1087 ntBASIC16.06■□□□□ 0.16
CCL4P13236 INGX-202ENST00000489074 768 ntBASIC16.06■□□□□ 0.16
CCL4P13236 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL4P13236 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL4P13236 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL4P13236 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL4P13236 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL4P13236 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL4P13236 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCL4P13236 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL4P13236 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL4P13236 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms