Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BMP3P12645 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.67■□□□□ 0.74
BMP3P12645 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.67■□□□□ 0.74
BMP3P12645 METTL21AP1-201ENST00000438852 635 ntBASIC19.67■□□□□ 0.74
BMP3P12645 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.67■□□□□ 0.74
BMP3P12645 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.67■□□□□ 0.74
BMP3P12645 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
BMP3P12645 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.67■□□□□ 0.74
BMP3P12645 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.67■□□□□ 0.74
BMP3P12645 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.67■□□□□ 0.74
BMP3P12645 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.67■□□□□ 0.74
BMP3P12645 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.67■□□□□ 0.74
BMP3P12645 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.67■□□□□ 0.74
BMP3P12645 AL513210.1-201ENST00000629608 234 ntBASIC19.67■□□□□ 0.74
BMP3P12645 AC105339.1-204ENST00000636249 355 ntBASIC19.67■□□□□ 0.74
BMP3P12645 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
BMP3P12645 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
BMP3P12645 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.67■□□□□ 0.74
BMP3P12645 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
BMP3P12645 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BMP3P12645 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
BMP3P12645 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.67■□□□□ 0.74
BMP3P12645 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.67■□□□□ 0.74
BMP3P12645 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.66■□□□□ 0.74
BMP3P12645 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 AL121761.2-201ENST00000598007 1648 ntBASIC19.66■□□□□ 0.74
BMP3P12645 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BMP3P12645 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
BMP3P12645 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.66■□□□□ 0.74
BMP3P12645 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.66■□□□□ 0.74
BMP3P12645 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BMP3P12645 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.66■□□□□ 0.74
BMP3P12645 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.66■□□□□ 0.74
BMP3P12645 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.66■□□□□ 0.74
BMP3P12645 DUX4L17-201ENST00000557360 1267 ntBASIC19.66■□□□□ 0.74
BMP3P12645 AC027612.4-201ENST00000605371 583 ntBASIC19.66■□□□□ 0.74
BMP3P12645 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.66■□□□□ 0.74
BMP3P12645 AC099522.2-201ENST00000607001 744 ntBASIC19.66■□□□□ 0.74
BMP3P12645 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
BMP3P12645 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.66■□□□□ 0.74
BMP3P12645 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BMP3P12645 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BMP3P12645 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BMP3P12645 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.65■□□□□ 0.74
BMP3P12645 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.65■□□□□ 0.74
BMP3P12645 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
BMP3P12645 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BMP3P12645 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 ADH5P3-201ENST00000433842 1137 ntBASIC19.65■□□□□ 0.74
BMP3P12645 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BMP3P12645 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.65■□□□□ 0.74
BMP3P12645 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.65■□□□□ 0.74
BMP3P12645 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.65■□□□□ 0.74
BMP3P12645 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
BMP3P12645 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.65■□□□□ 0.74
BMP3P12645 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.65■□□□□ 0.74
BMP3P12645 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.65■□□□□ 0.74
BMP3P12645 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BMP3P12645 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.65■□□□□ 0.74
BMP3P12645 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BMP3P12645 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BMP3P12645 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
BMP3P12645 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms