Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM1P09493 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TPM1P09493 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TPM1P09493 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.94■□□□□ 0.62
TPM1P09493 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.94■□□□□ 0.62
TPM1P09493 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.94■□□□□ 0.62
TPM1P09493 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TPM1P09493 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM1P09493 PCDHB17P-201ENST00000539533 2393 ntBASIC18.94■□□□□ 0.62
TPM1P09493 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.94■□□□□ 0.62
TPM1P09493 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TPM1P09493 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TPM1P09493 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
TPM1P09493 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TPM1P09493 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM1P09493 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM1P09493 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TPM1P09493 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM1P09493 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM1P09493 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TPM1P09493 ATP5G1P1-201ENST00000448724 379 ntBASIC18.93■□□□□ 0.62
TPM1P09493 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.93■□□□□ 0.62
TPM1P09493 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM1P09493 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM1P09493 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
TPM1P09493 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM1P09493 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM1P09493 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM1P09493 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM1P09493 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM1P09493 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
TPM1P09493 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TPM1P09493 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TPM1P09493 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM1P09493 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 LINC02199-201ENST00000506655 2702 ntBASIC18.92■□□□□ 0.62
TPM1P09493 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
TPM1P09493 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM1P09493 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TPM1P09493 STARP1-201ENST00000397973 869 ntBASIC18.92■□□□□ 0.62
TPM1P09493 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.92■□□□□ 0.62
TPM1P09493 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TPM1P09493 COX11P1-201ENST00000489116 835 ntBASIC18.92■□□□□ 0.62
TPM1P09493 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TPM1P09493 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
TPM1P09493 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM1P09493 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM1P09493 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TPM1P09493 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TPM1P09493 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPM1P09493 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM1P09493 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms