Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD48P09326 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.75■□□□□ 0.43
CD48P09326 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.75■□□□□ 0.43
CD48P09326 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CD48P09326 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CD48P09326 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.75■□□□□ 0.43
CD48P09326 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CD48P09326 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.75■□□□□ 0.43
CD48P09326 AC079328.2-201ENST00000561241 3354 ntBASIC17.75■□□□□ 0.43
CD48P09326 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.75■□□□□ 0.43
CD48P09326 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
CD48P09326 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.75■□□□□ 0.43
CD48P09326 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.75■□□□□ 0.43
CD48P09326 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CD48P09326 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.75■□□□□ 0.43
CD48P09326 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.75■□□□□ 0.43
CD48P09326 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.75■□□□□ 0.43
CD48P09326 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.75■□□□□ 0.43
CD48P09326 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD48P09326 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.75■□□□□ 0.43
CD48P09326 OR6D1P-202ENST00000641007 5290 ntBASIC17.75■□□□□ 0.43
CD48P09326 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.75■□□□□ 0.43
CD48P09326 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD48P09326 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.74■□□□□ 0.43
CD48P09326 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.74■□□□□ 0.43
CD48P09326 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.74■□□□□ 0.43
CD48P09326 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
CD48P09326 AL139384.1-201ENST00000612143 3047 ntBASIC17.74■□□□□ 0.43
CD48P09326 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.74■□□□□ 0.43
CD48P09326 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CD48P09326 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.74■□□□□ 0.43
CD48P09326 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 IFNL4P1-201ENST00000607083 540 ntBASIC17.74■□□□□ 0.43
CD48P09326 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CD48P09326 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CD48P09326 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.74■□□□□ 0.43
CD48P09326 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD48P09326 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CD48P09326 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CD48P09326 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.73■□□□□ 0.43
CD48P09326 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.73■□□□□ 0.43
CD48P09326 MTDHP4-201ENST00000600287 670 ntBASIC17.73■□□□□ 0.43
CD48P09326 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.73■□□□□ 0.43
CD48P09326 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.73■□□□□ 0.43
CD48P09326 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.73■□□□□ 0.43
CD48P09326 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CD48P09326 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.73■□□□□ 0.43
CD48P09326 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD48P09326 NCF1C-201ENST00000438382 1427 ntBASIC17.72■□□□□ 0.43
CD48P09326 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms